IL_5MRE_121
3D structure
- PDB id
- 5MRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial ribosome - Class B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- GAAU*AGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MRE_121 not in the Motif Atlas
- Geometric match to IL_4V88_432
- Geometric discrepancy: 0.1649
- The information below is about IL_4V88_432
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
5MRE|1|aa|G|739
5MRE|1|aa|A|740
5MRE|1|aa|A|741
5MRE|1|aa|U|742
*
5MRE|1|aa|A|779
5MRE|1|aa|G|780
5MRE|1|aa|A|781
5MRE|1|aa|C|782
Current chains
- Chain aa
- 15S ribosomal RNA
Nearby chains
- Chain B
- uL2m
- Chain FF
- bS6m
- Chain KK
- uS11m
- Chain RR
- bS18m
- Chain TT
- bS21m
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