IL_5MRF_146
3D structure
- PDB id
- 5MRF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial ribosome - Class C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.97 Å
Loop
- Sequence
- CUUAUU*AUCAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MRF_146 not in the Motif Atlas
- Homologous match to IL_5J7L_063
- Geometric discrepancy: 0.3587
- The information below is about IL_5J7L_063
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_80231.1
- Basepair signature
- cWW-L-R-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
5MRF|1|aa|C|1498
5MRF|1|aa|U|1499
5MRF|1|aa|U|1500
5MRF|1|aa|A|1501
5MRF|1|aa|U|1502
5MRF|1|aa|U|1503
*
5MRF|1|aa|A|1559
5MRF|1|aa|U|1560
5MRF|1|aa|C|1561
5MRF|1|aa|A|1562
5MRF|1|aa|G|1563
Current chains
- Chain aa
- 15S ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain M
- bL19m
- Chain OO
- uS15m
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