IL_5NGM_039
3D structure
- PDB id
- 5NGM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.9S structure of the 70S ribosome composing the S. aureus 100S complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAUG*CGC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5NGM_039 not in the Motif Atlas
- Geometric match to IL_5TBW_064
- Geometric discrepancy: 0.3474
- The information below is about IL_5TBW_064
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_15698.1
- Basepair signature
- cWW-tSH-cSH-cWW
- Number of instances in this motif group
- 9
Unit IDs
5NGM|1|AA|G|1075
5NGM|1|AA|A|1076
5NGM|1|AA|U|1077
5NGM|1|AA|G|1078
*
5NGM|1|AA|C|1165
5NGM|1|AA|G|1166
5NGM|1|AA|C|1167
Current chains
- Chain AA
- 23S Ribosomal RNA
Nearby chains
- Chain A4
- 50S ribosomal protein L36
- Chain AG
- 50S ribosomal protein L6
- Chain AK
- 50S ribosomal protein L16
Coloring options: