IL_5NP6_164
3D structure
- PDB id
- 5NP6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S structure prior to bypassing
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUGAG*CGAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 5NP6|1|Y|G|2780
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5NP6_164 not in the Motif Atlas
- Homologous match to IL_7RQB_102
- Geometric discrepancy: 0.1686
- The information below is about IL_7RQB_102
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.1
- Basepair signature
- cWW-tSH-tHW-tHS-cSH-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
5NP6|1|Y|C|2636
5NP6|1|Y|U|2637
5NP6|1|Y|G|2638
5NP6|1|Y|A|2639
5NP6|1|Y|G|2640
*
5NP6|1|Y|C|2774
5NP6|1|Y|G|2775
5NP6|1|Y|A|2776
5NP6|1|Y|G|2777
5NP6|1|Y|A|2778
5NP6|1|Y|U|2779
5NP6|1|Y|G|2780
5NP6|1|Y|A|2781
5NP6|1|Y|G|2782
Current chains
- Chain Y
- 23S ribosomal RNA
Nearby chains
- Chain b
- 50S ribosomal protein L3
- Chain h
- 50S ribosomal protein L13
Coloring options: