IL_5NRG_052
3D structure
- PDB id
- 5NRG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with RB02
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.44 Å
Loop
- Sequence
- ACUCGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 5NRG|1|X|G|2019
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5NRG_052 not in the Motif Atlas
- Geometric match to IL_4WF9_065
- Geometric discrepancy: 0.0986
- The information below is about IL_4WF9_065
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_76758.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 7
Unit IDs
5NRG|1|X|A|1713
5NRG|1|X|C|1714
5NRG|1|X|U|1715
5NRG|1|X|C|1716
5NRG|1|X|G|1717
5NRG|1|X|G|1718
*
5NRG|1|X|C|2017
5NRG|1|X|U|2018
5NRG|1|X|G|2019
5NRG|1|X|U|2020
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain B
- 50S ribosomal protein L3
- Chain H
- 50S ribosomal protein L14
Coloring options: