IL_5NRG_084
3D structure
- PDB id
- 5NRG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with RB02
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.44 Å
Loop
- Sequence
- UUGAG*CAAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 5NRG|1|X|G|2807
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5NRG_084 not in the Motif Atlas
- Homologous match to IL_4WF9_099
- Geometric discrepancy: 0.0574
- The information below is about IL_4WF9_099
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.4
- Basepair signature
- cWW-tSH-tHW-tHS-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
5NRG|1|X|U|2663
5NRG|1|X|U|2664
5NRG|1|X|G|2665
5NRG|1|X|A|2666
5NRG|1|X|G|2667
*
5NRG|1|X|C|2801
5NRG|1|X|A|2802
5NRG|1|X|A|2803
5NRG|1|X|G|2804
5NRG|1|X|A|2805
5NRG|1|X|U|2806
5NRG|1|X|G|2807
5NRG|1|X|A|2808
5NRG|1|X|G|2809
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain B
- 50S ribosomal protein L3
- Chain G
- 50S ribosomal protein L13
Coloring options: