IL_5O61_113
3D structure
- PDB id
- 5O61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The complete structure of the Mycobacterium smegmatis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- CUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5O61_113 not in the Motif Atlas
- Homologous match to IL_7A0S_094
- Geometric discrepancy: 0.1097
- The information below is about IL_7A0S_094
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.4
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
5O61|1|A|C|2876
5O61|1|A|U|2877
5O61|1|A|A|2878
5O61|1|A|G|2879
5O61|1|A|U|2880
5O61|1|A|A|2881
5O61|1|A|C|2882
*
5O61|1|A|G|2887
5O61|1|A|G|2888
5O61|1|A|A|2889
5O61|1|A|C|2890
5O61|1|A|C|2891
5O61|1|A|G|2892
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain G
- 50S ribosomal protein L6
- Chain L
- 50S ribosomal protein L14
Coloring options: