IL_5O61_158
3D structure
- PDB id
- 5O61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The complete structure of the Mycobacterium smegmatis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- CAGGG*UGGG
- Length
- 9 nucleotides
- Bulged bases
- 5O61|1|BA|G|645
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5O61_158 not in the Motif Atlas
- Homologous match to IL_5J7L_033
- Geometric discrepancy: 0.086
- The information below is about IL_5J7L_033
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
5O61|1|BA|C|642
5O61|1|BA|A|643
5O61|1|BA|G|644
5O61|1|BA|G|645
5O61|1|BA|G|646
*
5O61|1|BA|U|720
5O61|1|BA|G|721
5O61|1|BA|G|722
5O61|1|BA|G|723
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain BF
- 30S ribosomal protein S6
- Chain BO
- 30S ribosomal protein S15
- Chain BR
- 30S ribosomal protein S18 2
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