IL_5O61_183
3D structure
- PDB id
- 5O61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The complete structure of the Mycobacterium smegmatis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- GCCC*GUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5O61_183 not in the Motif Atlas
- Homologous match to IL_5J7L_059
- Geometric discrepancy: 0.1075
- The information below is about IL_5J7L_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65718.4
- Basepair signature
- cWW-cSH-cWS-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
5O61|1|BA|G|1384
5O61|1|BA|C|1385
5O61|1|BA|C|1386
5O61|1|BA|C|1387
*
5O61|1|BA|G|1481
5O61|1|BA|U|1482
5O61|1|BA|A|1483
5O61|1|BA|A|1484
5O61|1|BA|C|1485
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain BB
- Conserved domain protein
- Chain BL
- 30S ribosomal protein S12
- Chain BW
- Transfer RNA; tRNA
- Chain BX
- mRNA fragment
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