IL_5O61_191

3D structure

PDB id

5O61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The complete structure of the Mycobacterium smegmatis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.31 Å

Loop

Sequence

UGGC*GAG

Length

7 nucleotides

Bulged bases

5O61|1|BA|G|1425

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5O61_191 not in the Motif Atlas

Geometric match to IL_9DFE_082

Geometric discrepancy: 0.149

The information below is about IL_9DFE_082

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85599.2

Basepair signature

cWW-tHS-cWW

Number of instances in this motif group

9

Unit IDs

5O61|1|BA|U|1423
5O61|1|BA|G|1424
5O61|1|BA|G|1425
5O61|1|BA|C|1426
*
5O61|1|BA|G|1443
5O61|1|BA|A|1444
5O61|1|BA|G|1445

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BT

30S ribosomal protein S20

Chain Q

50S ribosomal protein L19