IL_5OOL_018
3D structure
- PDB id
- 5OOL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.06 Å
Loop
- Sequence
- UAG*CAA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5OOL_018 not in the Motif Atlas
- Geometric match to IL_2ZI0_001
- Geometric discrepancy: 0.1909
- The information below is about IL_2ZI0_001
- Detailed Annotation
- Isolated near basepair
- Broad Annotation
- Isolated near basepair
- Motif group
- IL_42997.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 23
Unit IDs
5OOL|1|A|U|2168
5OOL|1|A|A|2169
5OOL|1|A|G|2170
*
5OOL|1|A|C|2190
5OOL|1|A|A|2191
5OOL|1|A|A|2192
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain I
- 39S ribosomal protein L10, mitochondrial
- Chain J
- 39S ribosomal protein L11, mitochondrial
- Chain k
- 39S ribosomal protein L53, mitochondrial
- Chain l
- 39S ribosomal protein L54, mitochondrial
Coloring options: