IL_5OOM_034
3D structure
- PDB id
- 5OOM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.03 Å
Loop
- Sequence
- CCUAC*GCG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5OOM_034 not in the Motif Atlas
- Geometric match to IL_7RQB_051
- Geometric discrepancy: 0.1595
- The information below is about IL_7RQB_051
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.6
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 14
Unit IDs
5OOM|1|A|C|3148
5OOM|1|A|C|3149
5OOM|1|A|U|3150
5OOM|1|A|A|3151
5OOM|1|A|C|3152
*
5OOM|1|A|G|3161
5OOM|1|A|C|3162
5OOM|1|A|G|3163
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain L
- 39S ribosomal protein L14, mitochondrial
- Chain O
- 39S ribosomal protein L17, mitochondrial
- Chain Q
- 39S ribosomal protein L19, mitochondrial
Coloring options: