IL_5OT7_029
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGAGAG*UGGUC
- Length
- 11 nucleotides
- Bulged bases
- 5OT7|1|1|A|665
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5OT7_029 not in the Motif Atlas
- Geometric match to IL_9JA9_001
- Geometric discrepancy: 0.3505
- The information below is about IL_9JA9_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 17
Unit IDs
5OT7|1|1|G|661
5OT7|1|1|G|662
5OT7|1|1|A|663
5OT7|1|1|G|664
5OT7|1|1|A|665
5OT7|1|1|G|666
*
5OT7|1|1|U|740
5OT7|1|1|G|741
5OT7|1|1|G|742
5OT7|1|1|U|743
5OT7|1|1|C|744
Current chains
- Chain 1
- 16S Ribosomal RNA
Nearby chains
- Chain E
- 30S ribosomal protein S6
- Chain N
- 30S ribosomal protein S15
- Chain Q
- 30S ribosomal protein S18
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