IL_5OT7_056
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGAAG*CGAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5OT7_056 not in the Motif Atlas
- Geometric match to IL_5TBW_023
- Geometric discrepancy: 0.1496
- The information below is about IL_5TBW_023
- Detailed Annotation
- UAA/GAN variation
- Broad Annotation
- UAA/GAN variation
- Motif group
- IL_07235.3
- Basepair signature
- cWW-tSH-L-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
5OT7|1|1|C|1431
5OT7|1|1|G|1432
5OT7|1|1|A|1433
5OT7|1|1|A|1434
5OT7|1|1|G|1435
*
5OT7|1|1|C|1466
5OT7|1|1|G|1467
5OT7|1|1|A|1468
5OT7|1|1|G|1469
Current chains
- Chain 1
- 16S Ribosomal RNA
Nearby chains
- Chain 4
- Large subunit ribosomal RNA; LSU rRNA
- Chain S
- 30S ribosomal protein S20
- Chain u
- 50S ribosomal protein L19
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