IL_5OT7_070

3D structure

PDB id

5OT7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation factor G-ribosome complex captures in the absence of inhibitors.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGAAU*AUAG

Length

9 nucleotides

Bulged bases

5OT7|1|4|A|283

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5OT7_070 not in the Motif Atlas

Homologous match to IL_7RQB_011

Geometric discrepancy: 0.1547

The information below is about IL_7RQB_011

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

5OT7|1|4|C|280
5OT7|1|4|G|281
5OT7|1|4|A|282
5OT7|1|4|A|283
5OT7|1|4|U|284
*
5OT7|1|4|A|357
5OT7|1|4|U|358
5OT7|1|4|A|359
5OT7|1|4|G|360

Current chains

Chain 4

23S Ribosomal RNA

Nearby chains