IL_5OT7_092
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 5OT7|1|4|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5OT7_092 not in the Motif Atlas
- Homologous match to IL_7A0S_033
- Geometric discrepancy: 0.1443
- The information below is about IL_7A0S_033
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
5OT7|1|4|C|998
5OT7|1|4|U|999
5OT7|1|4|A|1000
5OT7|1|4|A|1001
5OT7|1|4|G|1002
*
5OT7|1|4|C|1153
5OT7|1|4|G|1154
5OT7|1|4|A|1155
5OT7|1|4|A|1156
5OT7|1|4|G|1157
Current chains
- Chain 4
- 23S Ribosomal RNA
Nearby chains
- Chain 5
- 5S ribosomal RNA; 5S rRNA
- Chain Y
- 50S ribosomal protein L30
- Chain v
- 50S ribosomal protein L20
- Chain w
- 50S ribosomal protein L21
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