IL_5OT7_110

3D structure

PDB id

5OT7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation factor G-ribosome complex captures in the absence of inhibitors.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UG*CACAA

Length

7 nucleotides

Bulged bases

5OT7|1|4|C|1584

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5OT7_110 not in the Motif Atlas

Homologous match to IL_7RQB_054

Geometric discrepancy: 0.1825

The information below is about IL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_67474.4

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

3

Unit IDs

5OT7|1|4|U|1415
5OT7|1|4|G|1416
*
5OT7|1|4|C|1582
5OT7|1|4|A|1583
5OT7|1|4|C|1584
5OT7|1|4|A|1586
5OT7|1|4|A|1587

Current chains

Chain 4

23S Ribosomal RNA

Nearby chains