IL_5OT7_165
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UUUCC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 5OT7|1|4|U|2689, 5OT7|1|4|C|2690
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5OT7_165 not in the Motif Atlas
- Homologous match to IL_4WF9_102
- Geometric discrepancy: 0.1465
- The information below is about IL_4WF9_102
- Detailed Annotation
- UAA/GAN related, with intercalation
- Broad Annotation
- UAA/GAN related, with intercalation
- Motif group
- IL_82016.1
- Basepair signature
- cWW-L-tHS-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
5OT7|1|4|U|2687
5OT7|1|4|U|2688
5OT7|1|4|U|2689
5OT7|1|4|C|2690
5OT7|1|4|C|2691
*
5OT7|1|4|G|2718
5OT7|1|4|G|2719
5OT7|1|4|U|2720
5OT7|1|4|A|2721
5OT7|1|4|G|2722
Current chains
- Chain 4
- 23S Ribosomal RNA
Nearby chains
- Chain h
- 50S ribosomal protein L3
- Chain s
- 50S ribosomal protein L17
- Chain u
- 50S ribosomal protein L19
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