IL_5OT7_187
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGAACUCUG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- 5OT7|1|4|G|1992
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5OT7_187 not in the Motif Atlas
- Homologous match to IL_7A0S_109
- Geometric discrepancy: 0.2228
- The information below is about IL_7A0S_109
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.1
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 10
Unit IDs
5OT7|1|4|G|1666
5OT7|1|4|G|1667
5OT7|1|4|A|1668
5OT7|1|4|A|1669
5OT7|1|4|C|1670
5OT7|1|4|U|1671
5OT7|1|4|C|1672
5OT7|1|4|U|1673
5OT7|1|4|G|1674
*
5OT7|1|4|C|1990
5OT7|1|4|U|1991
5OT7|1|4|G|1992
5OT7|1|4|U|1993
5OT7|1|4|C|1994
Current chains
- Chain 4
- 23S Ribosomal RNA
Nearby chains
- Chain h
- 50S ribosomal protein L3
- Chain p
- 50S ribosomal protein L14
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