IL_5T2C_206

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAAU*ACAUGUG

Length

12 nucleotides

Bulged bases

5T2C|1|A|G|119, 5T2C|1|A|U|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|A|C|118
5T2C|1|A|G|119
5T2C|1|A|A|120
5T2C|1|A|A|121
5T2C|1|A|U|122
*
5T2C|1|A|A|147
5T2C|1|A|C|148
5T2C|1|A|A|149
5T2C|1|A|U|150
5T2C|1|A|G|151
5T2C|1|A|U|152
5T2C|1|A|G|153

Current chains

Chain A

28S rRNA

Nearby chains

Chain C

5.8S ribosomal RNA; 5.8S rRNA

Chain b

60S ribosomal protein L35

Chain n

60S ribosomal protein L7a

Chain t

60S ribosomal protein L15