IL_5T7V_215

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAUG*CGC

Length

7 nucleotides

Bulged bases

5T7V|1|B|U|1077

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5T7V_215 not in the Motif Atlas

Homologous match to IL_5J7L_282

Geometric discrepancy: 0.1779

The information below is about IL_5J7L_282

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_57744.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

22

Unit IDs

5T7V|1|B|G|1075
5T7V|1|B|A|1076
5T7V|1|B|U|1077
5T7V|1|B|G|1078
*
5T7V|1|B|C|1165
5T7V|1|B|G|1166
5T7V|1|B|C|1167

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain LI

50S ribosomal protein L36

Chain LP

50S ribosomal protein L16