IL_5TCU_035
3D structure
- PDB id
- 5TCU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin sensitive Staphylococcus aureus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GCA*UUCCC
- Length
- 8 nucleotides
- Bulged bases
- 5TCU|1|A|C|944
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5TCU_035 not in the Motif Atlas
- Homologous match to IL_5J7L_041
- Geometric discrepancy: 0.4114
- The information below is about IL_5J7L_041
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_47078.3
- Basepair signature
- cWW-cWS-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
5TCU|1|A|G|943
5TCU|1|A|C|944
5TCU|1|A|A|945
*
5TCU|1|A|U|1391
5TCU|1|A|U|1392
5TCU|1|A|C|1393
5TCU|1|A|C|1394
5TCU|1|A|C|1395
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain D
- Transfer RNA; tRNA
- Chain E
- Transfer RNA; tRNA
- Chain SG
- 30S ribosomal protein S7
- Chain X
- mRNA
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