IL_5TCU_073

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UAG*CGAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5TCU_073 not in the Motif Atlas

Homologous match to IL_4WF9_014

Geometric discrepancy: 0.2078

The information below is about IL_4WF9_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_76658.1

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

4

Unit IDs

5TCU|1|B|U|336
5TCU|1|B|A|337
5TCU|1|B|G|338
*
5TCU|1|B|C|386
5TCU|1|B|G|387
5TCU|1|B|A|388
5TCU|1|B|A|389
5TCU|1|B|A|390

Current chains

Chain B

23S RRNA

Nearby chains

Chain L7

50S ribosomal protein L24