IL_5TCU_164
3D structure
- PDB id
- 5TCU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin sensitive Staphylococcus aureus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UGAACG*CGUUA
- Length
- 11 nucleotides
- Bulged bases
- 5TCU|1|A|G|32
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5TCU_164 not in the Motif Atlas
- Geometric match to IL_7VYX_008
- Geometric discrepancy: 0.3222
- The information below is about IL_7VYX_008
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.2
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
5TCU|1|A|U|31
5TCU|1|A|G|32
5TCU|1|A|A|33
5TCU|1|A|A|34
5TCU|1|A|C|35
5TCU|1|A|G|36
*
5TCU|1|A|C|557
5TCU|1|A|G|558
5TCU|1|A|U|559
5TCU|1|A|U|560
5TCU|1|A|A|561
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain S3
- 30S ribosomal protein S12
- Chain SC
- 30S ribosomal protein S4
Coloring options: