IL_5TZS_007
3D structure
- PDB id
- 5TZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Architecture of the yeast small subunit processome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.1 Å
Loop
- Sequence
- GUAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 5TZS|1|1|U|170
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5TZS_007 not in the Motif Atlas
- Homologous match to IL_4V88_394
- Geometric discrepancy: 0.4653
- The information below is about IL_4V88_394
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.3
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
5TZS|1|1|G|143
5TZS|1|1|U|144
5TZS|1|1|A|145
5TZS|1|1|U|146
5TZS|1|1|A|147
5TZS|1|1|A|148
5TZS|1|1|C|149
*
5TZS|1|1|G|165
5TZS|1|1|C|166
5TZS|1|1|U|167
5TZS|1|1|A|168
5TZS|1|1|A|169
5TZS|1|1|U|170
5TZS|1|1|A|171
5TZS|1|1|C|172
Current chains
- Chain 1
- 18S ribosomal RNA
Nearby chains
- Chain 3
- rpS6_ES6
Coloring options: