IL_5TZS_027
3D structure
- PDB id
- 5TZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Architecture of the yeast small subunit processome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.1 Å
Loop
- Sequence
- GGUUGAUG*CUGAC
- Length
- 13 nucleotides
- Bulged bases
- 5TZS|1|2|U|81
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5TZS_027 not in the Motif Atlas
- Geometric match to IL_3PLA_001
- Geometric discrepancy: 0.0904
- The information below is about IL_3PLA_001
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_69229.2
- Basepair signature
- cWW-tHS-tSH-tSS-cWW-cWW-cWW-L
- Number of instances in this motif group
- 11
Unit IDs
5TZS|1|2|G|78
5TZS|1|2|G|79
5TZS|1|2|U|80
5TZS|1|2|U|81
5TZS|1|2|G|82
5TZS|1|2|A|83
5TZS|1|2|U|84
5TZS|1|2|G|85
*
5TZS|1|2|C|325
5TZS|1|2|U|326
5TZS|1|2|G|327
5TZS|1|2|A|328
5TZS|1|2|C|329
Current chains
- Chain 2
- U3 snoRNA
Nearby chains
- Chain b
- Nop58
- Chain e
- Snu13
- Chain q
- Repeat protein 2
- Chain y
- Unassigned protein helices
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