IL_5U4I_125
3D structure
- PDB id
- 5U4I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGAA*UUUGC
- Length
- 9 nucleotides
- Bulged bases
- 5U4I|1|a|G|94
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5U4I_125 not in the Motif Atlas
- Geometric match to IL_3WBM_003
- Geometric discrepancy: 0.3588
- The information below is about IL_3WBM_003
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
5U4I|1|a|G|75
5U4I|1|a|G|76
5U4I|1|a|A|77
5U4I|1|a|A|78
*
5U4I|1|a|U|91
5U4I|1|a|U|92
5U4I|1|a|U|93
5U4I|1|a|G|94
5U4I|1|a|C|95
Current chains
- Chain a
- 16S rRNA
Nearby chains
No other chains within 10ÅColoring options: