IL_5UQ8_099
3D structure
- PDB id
- 5UQ8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome complex with dnaX mRNA stem-loop and E-site tRNA ('out' conformation)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CG*CACG
- Length
- 6 nucleotides
- Bulged bases
- 5UQ8|1|A|A|2572, 5UQ8|1|A|C|2573
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5UQ8_099 not in the Motif Atlas
- Homologous match to IL_7A0S_090
- Geometric discrepancy: 0.1263
- The information below is about IL_7A0S_090
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_42626.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 14
Unit IDs
5UQ8|1|A|C|2512
5UQ8|1|A|G|2513
*
5UQ8|1|A|C|2571
5UQ8|1|A|A|2572
5UQ8|1|A|C|2573
5UQ8|1|A|G|2574
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain E
- 50S ribosomal protein L3
- Chain N
- 50S ribosomal protein L13
Coloring options: