IL_5V93_159
3D structure
- PDB id
- 5V93 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- UACAAAG*UUAAAAG
- Length
- 14 nucleotides
- Bulged bases
- 5V93|1|a|A|1278
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5V93_159 not in the Motif Atlas
- Homologous match to IL_6CZR_160
- Geometric discrepancy: 0.2831
- The information below is about IL_6CZR_160
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09129.1
- Basepair signature
- cWW-tWH-tWH-L-R-L-R-tWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
5V93|1|a|U|1239
5V93|1|a|A|1240
5V93|1|a|C|1241
5V93|1|a|A|1242
5V93|1|a|A|1243
5V93|1|a|A|1244
5V93|1|a|G|1245
*
5V93|1|a|U|1276
5V93|1|a|U|1277
5V93|1|a|A|1278
5V93|1|a|A|1279
5V93|1|a|A|1280
5V93|1|a|A|1281
5V93|1|a|G|1282
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain g
- 30S ribosomal protein S7
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14 type Z
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