IL_5WDT_096
3D structure
- PDB id
- 5WDT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome-EF-Tu H84A complex with GppNHp
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUGAG*CGAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 5WDT|1|A|G|2780
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5WDT_096 not in the Motif Atlas
- Homologous match to IL_5J7L_345
- Geometric discrepancy: 0.1167
- The information below is about IL_5J7L_345
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.3
- Basepair signature
- cWW-tSH-tHW-tHS-cSH-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
5WDT|1|A|C|2636
5WDT|1|A|U|2637
5WDT|1|A|G|2638
5WDT|1|A|A|2639
5WDT|1|A|G|2640
*
5WDT|1|A|C|2774
5WDT|1|A|G|2775
5WDT|1|A|A|2776
5WDT|1|A|G|2777
5WDT|1|A|A|2778
5WDT|1|A|U|2779
5WDT|1|A|G|2780
5WDT|1|A|A|2781
5WDT|1|A|G|2782
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain J
- 50S ribosomal protein L13
Coloring options: