IL_5WLC_057
3D structure
- PDB id
- 5WLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The complete structure of the small subunit processome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- ACCA*UCCCU
- Length
- 9 nucleotides
- Bulged bases
- 5WLC|1|L1|C|1158, 5WLC|1|L1|C|1159
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5WLC_057 not in the Motif Atlas
- Homologous match to IL_4V88_443
- Geometric discrepancy: 0.1571
- The information below is about IL_4V88_443
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.9
- Basepair signature
- cWW-cWS-cHS-L-cWW-tWH
- Number of instances in this motif group
- 15
Unit IDs
5WLC|1|L1|A|1157
5WLC|1|L1|C|1158
5WLC|1|L1|C|1159
5WLC|1|L1|A|1160
*
5WLC|1|L1|U|1617
5WLC|1|L1|C|1618
5WLC|1|L1|C|1619
5WLC|1|L1|C|1620
5WLC|1|L1|U|1621
Current chains
- Chain L1
- 18S pre-rRNA
Nearby chains
- Chain L5
- rpS5_uS7
- Chain LC
- rpS16_uS9
- Chain LG
- rpS28_eS28
- Chain LO
- Utp1
- Chain LQ
- Utp12
- Chain SM
- Imp4
- Chain ST
- Nop14
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