IL_5ZET_075
3D structure
- PDB id
- 5ZET (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis P/P state 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGCGAAG*CGAUGUAUA
- Length
- 16 nucleotides
- Bulged bases
- 5ZET|1|A|G|2018, 5ZET|1|A|U|2033, 5ZET|1|A|U|2037
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ZET_075 not in the Motif Atlas
- Homologous match to IL_5J7L_313
- Geometric discrepancy: 0.0769
- The information below is about IL_5J7L_313
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_17069.5
- Basepair signature
- cWW-tSH-tHH-cSS-tWW-tHH-tSS-cWW
- Number of instances in this motif group
- 5
Unit IDs
5ZET|1|A|U|2015
5ZET|1|A|G|2016
5ZET|1|A|C|2017
5ZET|1|A|G|2018
5ZET|1|A|A|2019
5ZET|1|A|A|2020
5ZET|1|A|G|2021
*
5ZET|1|A|C|2030
5ZET|1|A|G|2031
5ZET|1|A|A|2032
5ZET|1|A|U|2033
5ZET|1|A|G|2034
5ZET|1|A|U|2035
5ZET|1|A|A|2036
5ZET|1|A|U|2037
5ZET|1|A|A|2038
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
Coloring options: