IL_5ZLU_024

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAAACC*GACUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5ZLU_024 not in the Motif Atlas

Homologous match to IL_4LFB_019

Geometric discrepancy: 0.2165

The information below is about IL_4LFB_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31561.1

Basepair signature

cWW-L-R-tWH-tWH-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

5ZLU|1|G|G|450
5ZLU|1|G|A|451
5ZLU|1|G|A|452
5ZLU|1|G|A|453
5ZLU|1|G|C|454
5ZLU|1|G|C|455
*
5ZLU|1|G|G|477
5ZLU|1|G|A|478
5ZLU|1|G|C|479
5ZLU|1|G|U|480
5ZLU|1|G|G|481
5ZLU|1|G|A|482
5ZLU|1|G|C|483

Current chains

Chain G

16S ribosomal RNA

Nearby chains

Chain U

30S ribosomal protein S16