IL_5ZLU_096

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUG*CCAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5ZLU_096 not in the Motif Atlas

Geometric match to IL_4M4O_001

Geometric discrepancy: 0.3051

The information below is about IL_4M4O_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

5ZLU|1|V|C|1166
5ZLU|1|V|U|1167
5ZLU|1|V|G|1168
*
5ZLU|1|V|C|1180
5ZLU|1|V|C|1181
5ZLU|1|V|A|1182
5ZLU|1|V|G|1183

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain v

50S ribosomal protein L30