IL_5ZLU_136
3D structure
- PDB id
- 5ZLU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome Structure bound to ABC-F protein.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CCGAG*CGGCG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ZLU_136 not in the Motif Atlas
- Homologous match to IL_7A0S_087
- Geometric discrepancy: 0.1552
- The information below is about IL_7A0S_087
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_87767.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
5ZLU|1|V|C|2466
5ZLU|1|V|C|2467
5ZLU|1|V|G|2468
5ZLU|1|V|A|2469
5ZLU|1|V|G|2470
*
5ZLU|1|V|C|2480
5ZLU|1|V|G|2481
5ZLU|1|V|G|2482
5ZLU|1|V|C|2483
5ZLU|1|V|G|2484
Current chains
- Chain V
- 23S ribosomal RNA
Nearby chains
- Chain BB
- 50S ribosomal protein L36
- Chain DD
- Transfer RNA; tRNA
- Chain j
- 50S ribosomal protein L16
- Chain s
- 50S ribosomal protein L25
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