IL_5ZLU_145
3D structure
- PDB id
- 5ZLU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome Structure bound to ABC-F protein.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UUUCC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 5ZLU|1|V|U|2689, 5ZLU|1|V|C|2690
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ZLU_145 not in the Motif Atlas
- Homologous match to IL_4WF9_102
- Geometric discrepancy: 0.1959
- The information below is about IL_4WF9_102
- Detailed Annotation
- UAA/GAN related, with intercalation
- Broad Annotation
- UAA/GAN related, with intercalation
- Motif group
- IL_23774.1
- Basepair signature
- cWW-L-R-L-tHS-cWW
- Number of instances in this motif group
- 11
Unit IDs
5ZLU|1|V|U|2687
5ZLU|1|V|U|2688
5ZLU|1|V|U|2689
5ZLU|1|V|C|2690
5ZLU|1|V|C|2691
*
5ZLU|1|V|G|2718
5ZLU|1|V|G|2719
5ZLU|1|V|U|2720
5ZLU|1|V|A|2721
5ZLU|1|V|G|2722
Current chains
- Chain V
- 23S ribosomal RNA
Nearby chains
- Chain a
- 50S ribosomal protein L3
- Chain k
- 50S ribosomal protein L17
- Chain m
- 50S ribosomal protein L19
Coloring options: