IL_5ZLU_147

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAUAAC*GGAAGC

Length

12 nucleotides

Bulged bases

5ZLU|1|V|A|2765

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5ZLU_147 not in the Motif Atlas

Homologous match to IL_5J7L_350

Geometric discrepancy: 0.1783

The information below is about IL_5J7L_350

Detailed Annotation

UAA/GAN with extra cWW

Broad Annotation

No text annotation

Motif group

IL_49767.8

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

6

Unit IDs

5ZLU|1|V|G|2737
5ZLU|1|V|A|2738
5ZLU|1|V|U|2739
5ZLU|1|V|A|2740
5ZLU|1|V|A|2741
5ZLU|1|V|C|2742
*
5ZLU|1|V|G|2762
5ZLU|1|V|G|2763
5ZLU|1|V|A|2764
5ZLU|1|V|A|2765
5ZLU|1|V|G|2766
5ZLU|1|V|C|2767

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain BB

50S ribosomal protein L36

Chain d

50S ribosomal protein L6

Chain g

50S ribosomal protein L13