IL_5ZLU_150

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGUAAG*UUGAG

Length

11 nucleotides

Bulged bases

5ZLU|1|V|G|2867

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5ZLU_150 not in the Motif Atlas

Homologous match to IL_7A0S_101

Geometric discrepancy: 0.397

The information below is about IL_7A0S_101

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_48489.1

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

8

Unit IDs

5ZLU|1|V|U|2847
5ZLU|1|V|G|2848
5ZLU|1|V|U|2849
5ZLU|1|V|A|2850
5ZLU|1|V|A|2851
5ZLU|1|V|G|2852
*
5ZLU|1|V|U|2865
5ZLU|1|V|U|2866
5ZLU|1|V|G|2867
5ZLU|1|V|A|2868
5ZLU|1|V|G|2869

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain k

50S ribosomal protein L17

Chain m

50S ribosomal protein L19