IL_5ZLU_166

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGCG*CGC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5ZLU_166 not in the Motif Atlas

Homologous match to IL_6CZR_136

Geometric discrepancy: 0.2407

The information below is about IL_6CZR_136

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05564.3

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

14

Unit IDs

5ZLU|1|G|G|594
5ZLU|1|G|G|595
5ZLU|1|G|C|596
5ZLU|1|G|G|597
*
5ZLU|1|G|C|643
5ZLU|1|G|G|644
5ZLU|1|G|C|645

Current chains

Chain G

16S ribosomal RNA

Nearby chains

Chain A

30S ribosomal protein S17

Chain N

30S ribosomal protein S8