IL_5ZLU_191

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAAGG*CCC

Length

8 nucleotides

Bulged bases

5ZLU|1|V|A|1847

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5ZLU_191 not in the Motif Atlas

Geometric match to IL_8C3A_432

Geometric discrepancy: 0.3101

The information below is about IL_8C3A_432

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_58579.2

Basepair signature

cWW-L-cWW-cWW

Number of instances in this motif group

6

Unit IDs

5ZLU|1|V|G|1846
5ZLU|1|V|A|1847
5ZLU|1|V|A|1848
5ZLU|1|V|G|1849
5ZLU|1|V|G|1850
*
5ZLU|1|V|C|1892
5ZLU|1|V|C|1893
5ZLU|1|V|C|1894

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain EE

Macrolide efflux protein

Chain G

Small subunit ribosomal RNA; SSU rRNA

Chain Z

50S ribosomal protein L2