IL_6AWC_026
3D structure
- PDB id
- 6AWC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 30S ribosomal subunit and RNA polymerase complex in rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.9 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 6AWC|1|A|C|518, 6AWC|1|A|G|530, 6AWC|1|A|A|532, 6AWC|1|A|U|534, 6AWC|1|A|A|535
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6AWC_026 not in the Motif Atlas
- Homologous match to IL_6CZR_133
- Geometric discrepancy: 0.462
- The information below is about IL_6CZR_133
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.3
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
6AWC|1|A|G|515
6AWC|1|A|U|516
6AWC|1|A|G|517
6AWC|1|A|C|518
6AWC|1|A|C|519
6AWC|1|A|A|520
6AWC|1|A|G|521
*
6AWC|1|A|C|528
6AWC|1|A|G|529
6AWC|1|A|G|530
6AWC|1|A|U|531
6AWC|1|A|A|532
6AWC|1|A|A|533
6AWC|1|A|U|534
6AWC|1|A|A|535
6AWC|1|A|C|536
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain F
- 30S ribosomal protein S3
- Chain G
- 30S ribosomal protein S4
- Chain O
- 30S ribosomal protein S12
Coloring options: