IL_6AWD_023
3D structure
- PDB id
- 6AWD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 30S (S1 depleted) ribosomal subunit and RNA polymerase complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.1 Å
Loop
- Sequence
- GAAGGG*CAUUGAC
- Length
- 13 nucleotides
- Bulged bases
- 6AWD|1|A|U|479
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6AWD_023 not in the Motif Atlas
- Homologous match to IL_5J7L_023
- Geometric discrepancy: 0.5636
- The information below is about IL_5J7L_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_70801.1
- Basepair signature
- cWW-cWW-L-R-tWW-L-R-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
6AWD|1|A|G|450
6AWD|1|A|A|451
6AWD|1|A|A|452
6AWD|1|A|G|453
6AWD|1|A|G|454
6AWD|1|A|G|455
*
6AWD|1|A|C|477
6AWD|1|A|A|478
6AWD|1|A|U|479
6AWD|1|A|U|480
6AWD|1|A|G|481
6AWD|1|A|A|482
6AWD|1|A|C|483
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain S
- 30S ribosomal protein S16
Coloring options: