IL_6B4V_192
3D structure
- PDB id
- 6B4V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- UGAAAGAC*GGGGAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6B4V_192 not in the Motif Atlas
- Homologous match to IL_4LFB_026
- Geometric discrepancy: 0.1379
- The information below is about IL_4LFB_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04211.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
6B4V|1|EB|U|605
6B4V|1|EB|G|606
6B4V|1|EB|A|607
6B4V|1|EB|A|608
6B4V|1|EB|A|609
6B4V|1|EB|G|610
6B4V|1|EB|A|611
6B4V|1|EB|C|612
*
6B4V|1|EB|G|628
6B4V|1|EB|G|629
6B4V|1|EB|G|630
6B4V|1|EB|G|631
6B4V|1|EB|A|632
6B4V|1|EB|G|633
Current chains
- Chain EB
- 16S ribosomal RNA
Nearby chains
- Chain CD
- 30S ribosomal protein S16
- Chain QC
- 30S ribosomal protein S4
- Chain UC
- 30S ribosomal protein S8
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