IL_6BOH_007
3D structure
- PDB id
- 6BOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- UGAC*GG
- Length
- 6 nucleotides
- Bulged bases
- 6BOH|1|A|G|129|||B, 6BOH|1|A|A|130
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOH_007 not in the Motif Atlas
- Homologous match to IL_6CZR_119
- Geometric discrepancy: 0.2066
- The information below is about IL_6CZR_119
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_33761.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
6BOH|1|A|U|129|||A
6BOH|1|A|G|129|||B
6BOH|1|A|A|130
6BOH|1|A|C|131
*
6BOH|1|A|G|231
6BOH|1|A|G|232
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain AB
- 30S ribosomal protein S17
- Chain DB
- 30S ribosomal protein S20
- Chain ZA
- 30S ribosomal protein S16
Coloring options: