IL_6BOH_015
3D structure
- PDB id
- 6BOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GCAAU*AC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOH_015 not in the Motif Atlas
- Homologous match to IL_5J7L_018
- Geometric discrepancy: 0.1158
- The information below is about IL_5J7L_018
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_03109.3
- Basepair signature
- cWW-cWS-tWH-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
6BOH|1|A|G|371
6BOH|1|A|C|372
6BOH|1|A|A|373
6BOH|1|A|A|374
6BOH|1|A|U|375
*
6BOH|1|A|A|389
6BOH|1|A|C|390
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain ZA
- 30S ribosomal protein S16
Coloring options: