IL_6BOH_022
3D structure
- PDB id
- 6BOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 6BOH|1|A|A|572
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOH_022 not in the Motif Atlas
- Homologous match to IL_4LFB_022
- Geometric discrepancy: 0.1071
- The information below is about IL_4LFB_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.6
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 4
Unit IDs
6BOH|1|A|C|569
6BOH|1|A|G|570
6BOH|1|A|U|571
6BOH|1|A|A|572
6BOH|1|A|A|573
6BOH|1|A|A|574
6BOH|1|A|G|575
*
6BOH|1|A|C|880
6BOH|1|A|G|881
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain AB
- 30S ribosomal protein S17
- Chain OA
- 30S ribosomal protein S5
- Chain RA
- 30S ribosomal protein S8
- Chain VA
- 30S ribosomal protein S12
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