IL_6BOH_035
3D structure
- PDB id
- 6BOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GAC*GUAC
- Length
- 7 nucleotides
- Bulged bases
- 6BOH|1|A|A|1394
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOH_035 not in the Motif Atlas
- Geometric match to IL_4V9F_097
- Geometric discrepancy: 0.2771
- The information below is about IL_4V9F_097
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
6BOH|1|A|G|922
6BOH|1|A|A|923
6BOH|1|A|C|924
*
6BOH|1|A|G|1392
6BOH|1|A|U|1393
6BOH|1|A|A|1394
6BOH|1|A|C|1395
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain OA
- 30S ribosomal protein S5
Coloring options: