IL_6BOH_210
3D structure
- PDB id
- 6BOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GUUG*CACUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOH_210 not in the Motif Atlas
- Homologous match to IL_6CZR_158
- Geometric discrepancy: 0.2657
- The information below is about IL_6CZR_158
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- Minor groove platform
- Motif group
- IL_40144.1
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
6BOH|1|FB|G|1124
6BOH|1|FB|U|1125
6BOH|1|FB|U|1126
6BOH|1|FB|G|1127
*
6BOH|1|FB|C|1145
6BOH|1|FB|A|1146
6BOH|1|FB|C|1147
6BOH|1|FB|U|1148
6BOH|1|FB|C|1149
Current chains
- Chain FB
- 16S ribosomal RNA
Nearby chains
- Chain XC
- 30S ribosomal protein S9
- Chain YC
- 30S ribosomal protein S10
Coloring options: