IL_6BOH_215
3D structure
- PDB id
- 6BOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CCAC*GGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOH_215 not in the Motif Atlas
- Geometric match to IL_4V88_461
- Geometric discrepancy: 0.3392
- The information below is about IL_4V88_461
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_36174.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
6BOH|1|FB|C|1259
6BOH|1|FB|C|1260
6BOH|1|FB|A|1261
6BOH|1|FB|C|1262
*
6BOH|1|FB|G|1273
6BOH|1|FB|G|1274
6BOH|1|FB|A|1275
6BOH|1|FB|G|1276
Current chains
- Chain FB
- 16S ribosomal RNA
Nearby chains
- Chain JD
- 30S ribosomal protein Thx
Coloring options: