IL_6BOH_373
3D structure
- PDB id
- 6BOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- AUA*UGU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOH_373 not in the Motif Atlas
- Homologous match to IL_9DFE_029
- Geometric discrepancy: 0.0913
- The information below is about IL_9DFE_029
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42997.3
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 20
Unit IDs
6BOH|1|GB|A|870
6BOH|1|GB|U|871
6BOH|1|GB|A|872
*
6BOH|1|GB|U|905
6BOH|1|GB|G|906
6BOH|1|GB|U|907
Current chains
- Chain GB
- 23S ribosomal RNA
Nearby chains
- Chain BC
- 50S ribosomal protein L25
- Chain HB
- 5S ribosomal RNA; 5S rRNA
- Chain SB
- 50S ribosomal protein L16
Coloring options: